PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG006760.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 175aa MW: 19757.3 Da PI: 10.0462

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG006760.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.1	1.3e-10	37	84	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +lv v++lG ++W+ a+ g++ +k+c++rw +yl TRIDC1BG006760.3 37 KGPWTENEDAQLVWFVRLLGERRWDFLAQVSGLRGGGKSCRLRWVNYL 84 79****************************54468*******97 PP
2	Myb_DNA-binding	53.1	7.6e-17	90	135	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgr T++E+ l++ +++++G++ W++Iar+++ gRt++++k++w++++ TRIDC1BG006760.3 90 RGRITADEERLILSLHAEWGSR-WSRIARKLP-GRTDNEIKNYWRTHM 135 899*****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
TKPTTKTPGG GSSVHHIDRP AMCNNSGGRG GAMAARKGPW TENEDAQLVW FVRLLGERRW 60 DFLAQVSGLR GGGKSCRLRW VNYLHPGLKR GRITADEERL ILSLHAEWGS RWSRIARKLP 120 GRTDNEIKNY WRTHMRKKAE EEAATSASEE KKAEVVQYCS PVDMDQLWND IAASE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59780.3	7e-54	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG006760.3