PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG006760.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 207aa    MW: 22958.5 Da    PI: 9.226
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG006760.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.53.5e-142774148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+ Ed +lv  v++lG ++W+  a+  g++Rt+k+c++rw +yl
  TRIDC1BG006760.4 27 KGPWTENEDAQLVWFVRLLGERRWDFLAQVSGLRRTGKSCRLRWVNYL 74
                      79********************************************97 PP
2Myb_DNA-binding52.61e-1680125148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rgr T++E+ l++ +++++G++ W++Iar+++ gRt++++k++w++++
  TRIDC1BG006760.4  80 RGRITADEERLILSLHAEWGSR-WSRIARKLP-GRTDNEIKNYWRTHM 125
                       899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
GSSVHHIDRP AMCNNSGGRG GAMAARKGPW TENEDAQLVW FVRLLGERRW DFLAQVSGLR  60
RTGKSCRLRW VNYLHPGLKR GRITADEERL ILSLHAEWGS RWSRIARKLP GRTDNEIKNY  120
WRTHMRKKAQ EEKMLAKNKA SSSPSSSSAD STSLTTTTCS ASPTATSSSA ATTEEAPQES  180
TTSMDDEAEE EAATSASEEK KAEVVQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.37e-60MYB family protein