PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG007240.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 71aa    MW: 7864.93 Da    PI: 10.2889
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG007240.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.12.1e-27959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      +rien++ rqvtfskR+ g++KKA EL vLCda+v v++fs+tg+ly+ys+
  TRIDC1BG007240.1  9 ERIENTTSRQVTFSKRKSGLFKKARELGVLCDAQVGVLLFSNTGRLYDYSN 59
                      69***********************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 71 aa     Download sequence    
MVRGKTVIER IENTTSRQVT FSKRKSGLFK KARELGVLCD AQVGVLLFSN TGRLYDYSNS  60
NSGYATLDVS S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51870.28e-28MIKC_MADS family protein