PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG009160.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 199aa    MW: 21830.7 Da    PI: 9.7995
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG009160.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.41.6e-202786357
                      --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      +R+++t+eql +Lee+++   r+p+a+++++++++l    +++ ++V++WFqN++a++++
  TRIDC1BG009160.4 27 TRWCPTPEQLMILEEMYRGgLRTPNASQIQQITAHLahygRIEGKNVFYWFQNHKARDRQ 86
                      8*****************99*************************************996 PP
2Wus_type_Homeobox120.28.5e-392687364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       +tRW+PtpeQ++iLee+y+ GlrtPn+++iq+ita+L++yG+ie+kNVfyWFQN+kaR+rqk
   TRIDC1BG009160.4 26 TTRWCPTPEQLMILEEMYRGGLRTPNASQIQQITAHLAHYGRIEGKNVFYWFQNHKARDRQK 87
                       79***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
RARALARAMA ATATATTAAT SVVTGTTRWC PTPEQLMILE EMYRGGLRTP NASQIQQITA  60
HLAHYGRIEG KNVFYWFQNH KARDRQKLRR RLCMSRHLLS CAHYYAAANA GQYHHQQQLL  120
GAGAVPPPLL QHQQQQQYYS ASCAGGSYDQ HLLPTTVPAS AYAAAAAGYA YPFAAVPASR  180
CADPSPPNTP LSFHHQVQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.11e-39WOX family protein