PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG010030.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 229aa    MW: 25892.1 Da    PI: 9.0149
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG010030.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.69.8e-16147455
               AP2  4 kGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      +GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  TRIDC1BG010030.4  1 RGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 47
                      8*****************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
RGVTFYRRTG RWESHIWDCG KQVYLGGFDT AHAAARAYDR AAIKFRGVDA DINFNLSDYE  60
DDMKQMKGLS KEEFVHVLRR QSTGFSRGSS KYRGVTLHKC GRWEARMGQF LGKKAYDKAA  120
IKCNGREAVT NFEPSTYDAE LLSEVAAEGA DVDLNLSISQ PTSQSPKRDK SSLGLQLHHG  180
SYEGSELKRP KVDAPPEMVA IPHRYPLLTE HPPIWHGQSY PIFLNNEVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.24e-89AP2 family protein