PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG010310.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 156aa MW: 17186.5 Da PI: 10.3

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG010310.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.0002	65	88	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k+Fs s+L++H + + TRIDC1BG010310.1 65 YVCNRCNgKHFSVLSDLRTHEKHC 88 9*******************9976 PP
2	zf-C2H2	11	0.0014	96	112	5	21
TTTEEESSHHHHHHHHH CS zf-C2H2 5 dCgksFsrksnLkrHir 21 Cg++Fsrk+ L H + TRIDC1BG010310.1 96 SCGTTFSRKDKLAGHVS 112 5************9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
LANPTTRLFG PSGYDAAVDA AGRRNKYSCP QDGCRWNRRH AKFQPLKSVI CVKNHYKRSH 60 CPKMYVCNRC NGKHFSVLSD LRTHEKHCGD HRWICSCGTT FSRKDKLAGH VSLFAGHQPV 120 APLAAGRHGK RSSLLSTSSS DLAGNCTNTG FSITPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	7e-58	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG010310.1