PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG010590.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 203aa    MW: 20775.6 Da    PI: 7.0703
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG010590.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260134.25e-42321311100
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCk+lrr+C++ Cvlapyfp ++p+kfa +h++FGasn++kll++lpee+r da+ss+vyeA arardPvyG++g i +lq+q++ lka+
  TRIDC1BG010590.2  32 PCAACKILRRRCVDRCVLAPYFPPTDPHKFATAHRVFGASNIIKLLQDLPEEQRADAVSSMVYEAAARARDPVYGSAGAICQLQRQVDGLKAQ 124
                       7******************************************************************************************** PP

            DUF260  94 lallkee 100
                       la++++e
  TRIDC1BG010590.2 125 LARAQAE 131
                       **99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MESSGDTAPL HSSPTPTSPP AMATGTAVVM SPCAACKILR RRCVDRCVLA PYFPPTDPHK  60
FATAHRVFGA SNIIKLLQDL PEEQRADAVS SMVYEAAARA RDPVYGSAGA ICQLQRQVDG  120
LKAQLARAQA ELAAARAHHA HLVALLCVEV ATAAATPPQD AYCTGVGGSQ SQLAAPPGVG  180
SAPTDALYTV DGSAAGGSGI MQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.13e-53LBD family protein