PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG010870.25
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 74aa    MW: 8119.23 Da    PI: 10.4837
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG010870.25genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA37.14.3e-12733935
               GATA  9 TplWRrgp.dgnktLCnaCGlyyrkkgl 35
                       TplWR+g  d++  LCnaCG ++r kg+
  TRIDC1BG010870.25  7 TPLWRNGTpDKPV-LCNACGSRWRIKGT 33
                       9******945555.**********9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    
MHVHGGTPLW RNGTPDKPVL CNACGSRWRI KGTLVNYTPA HRREDTDAGE AGPDKLKLNG  60
QKQPKKRPNC TTAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.26e-22GATA family protein