PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG010870.27
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 87aa    MW: 9668.02 Da    PI: 11.1047
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG010870.27genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA36.19.1e-12546135
               GATA  1 CsnCgttk.......TplWRrgp.dgnktLCnaCGlyyrkkgl 35
                       Cs+C++         TplWR+g  d++  LCnaCG ++r kg+
  TRIDC1BG010870.27  5 CSSCHARVtvwsrpgTPLWRNGTpDKPV-LCNACGSRWRIKGT 46
                       999999877788899*******945555.**********9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
RARRCSSCHA RVTVWSRPGT PLWRNGTPDK PVLCNACGSR WRIKGTLVNY TPAHRREDTD  60
AGEAGPDKLK LNGQKQPKKR PNCTTAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.22e-21GATA family protein