PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG011700.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 1163aa MW: 126091 Da PI: 5.2968

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG011700.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.3	4.2e-09	711	753	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE e + + + +G++ +++I++ ++ ++t +c+++++k+ TRIDC1BG011700.2 711 PWTHEEKEVFMQMLASFGKN-FSKISNFLQ-HKTTADCVEFYYKH 753 8***************99.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1163 aa Download sequence
ASPPAPLIPP TLSAVSEGYY RQGAGTYDRS YPDEPLGYTP SRSDRYWLEE DPPTGYKGFS 60 RYGGGGGRRD GRDLRGSYRR SPFRSYGGDF PRGHQEPPPP PPSRRSPLRS VAVPICYDPP 120 SDRADREDRE HQPRATPWRP LRRRESRSDA ADAAGAGPLS ARQSATAGAA SEKNAPSQSA 180 AVADSQSAEE ETPRKKPRLG WGQGLAKYEK QKVPGSSESA EPVAEGSPDG VEQKEVVGAP 240 APALCASPVA APSSPPAAPA LCASPVAAPA LPSFAPPSSS PVPEDKSCEL TANTVTMSSK 300 DIPGAEVQAY NDEIPIKLGQ LDGDRIGSLA NVLAELLQHE DSCSGDSRRL TNSSKLLLLK 360 ENIARELEKT ELEIDSLECE LKSVSTESEN KALEDAETKP EICGTSSSPK EQGVLTPCKL 420 PVEQEADANG VDLMDVVTAP VRSVTAVSSG ESVACPGVVA EAEVAVAADV APLKPSEGTG 480 SQIDAHCPRQ EPSLSHDNVS SMKADGSNAL STRQCSHRID SRNLIPSIIA VNNDIAKEFN 540 ELVFKPLPAG QPCLGLSSQM KNDLSVRKKL GIHKNRLRFK EQALTFKFKV LRHLWKEDVR 600 LLSVRKQRPK SNKRTDQSNR ASQSGSQRQR SSIRSRLGMP AGNLSTFPTT EISDVANKMF 660 TEFQFKRCRN YLKMPALIID EKEKESASFV SKNGLIEDPV SVEKERSVIN PWTHEEKEVF 720 MQMLASFGKN FSKISNFLQH KTTADCVEFY YKHHKSDSFR EVKKLLDLRQ QQPTGNYLGT 780 KSGKKWNPEN AASLDMLGNA ASVVAAHGLD YANRVEKDTE KSIIRTSCKS DVSAVAKGSL 840 DKDGIANVSL HERESVAADV LAGICGTLSP EGMGSCITSS ADHGQKIGAT RMEYLIATPE 900 ADKSFDEEDD LSDQECEVDS VDWNDNEKSL FIEALNNHGK DFARISSYVK SKSYEQCKVF 960 FSKARISLGL DLIYQQTTDT GLPTGDASGG RSDTDEACAA EMDSPICSTQ SPVEMEMEVC 1020 PSADKTLQGH LLSGITFKQS ETDRSDGPEI VDLTIEEGEI KADDTNNCNI PVDHRQSSEA 1080 THQSTPSCAP IDINSSESTG SMENREHSNQ VSVHGNGAMA SSTEQPVGAH LEISSSLHIV 1140 EVIEPIRYPV TKDLQNMHLR VHT

Sequence ? help Back to Top

Protein Sequence Length: 1163 aa Download sequence

ASPPAPLIPP TLSAVSEGYY RQGAGTYDRS YPDEPLGYTP SRSDRYWLEE DPPTGYKGFS  60
RYGGGGGRRD GRDLRGSYRR SPFRSYGGDF PRGHQEPPPP PPSRRSPLRS VAVPICYDPP  120
SDRADREDRE HQPRATPWRP LRRRESRSDA ADAAGAGPLS ARQSATAGAA SEKNAPSQSA  180
AVADSQSAEE ETPRKKPRLG WGQGLAKYEK QKVPGSSESA EPVAEGSPDG VEQKEVVGAP  240
APALCASPVA APSSPPAAPA LCASPVAAPA LPSFAPPSSS PVPEDKSCEL TANTVTMSSK  300
DIPGAEVQAY NDEIPIKLGQ LDGDRIGSLA NVLAELLQHE DSCSGDSRRL TNSSKLLLLK  360
ENIARELEKT ELEIDSLECE LKSVSTESEN KALEDAETKP EICGTSSSPK EQGVLTPCKL  420
PVEQEADANG VDLMDVVTAP VRSVTAVSSG ESVACPGVVA EAEVAVAADV APLKPSEGTG  480
SQIDAHCPRQ EPSLSHDNVS SMKADGSNAL STRQCSHRID SRNLIPSIIA VNNDIAKEFN  540
ELVFKPLPAG QPCLGLSSQM KNDLSVRKKL GIHKNRLRFK EQALTFKFKV LRHLWKEDVR  600
LLSVRKQRPK SNKRTDQSNR ASQSGSQRQR SSIRSRLGMP AGNLSTFPTT EISDVANKMF  660
TEFQFKRCRN YLKMPALIID EKEKESASFV SKNGLIEDPV SVEKERSVIN PWTHEEKEVF  720
MQMLASFGKN FSKISNFLQH KTTADCVEFY YKHHKSDSFR EVKKLLDLRQ QQPTGNYLGT  780
KSGKKWNPEN AASLDMLGNA ASVVAAHGLD YANRVEKDTE KSIIRTSCKS DVSAVAKGSL  840
DKDGIANVSL HERESVAADV LAGICGTLSP EGMGSCITSS ADHGQKIGAT RMEYLIATPE  900
ADKSFDEEDD LSDQECEVDS VDWNDNEKSL FIEALNNHGK DFARISSYVK SKSYEQCKVF  960
FSKARISLGL DLIYQQTTDT GLPTGDASGG RSDTDEACAA EMDSPICSTQ SPVEMEMEVC  1020
PSADKTLQGH LLSGITFKQS ETDRSDGPEI VDLTIEEGEI KADDTNNCNI PVDHRQSSEA  1080
THQSTPSCAP IDINSSESTG SMENREHSNQ VSVHGNGAMA SSTEQPVGAH LEISSSLHIV  1140
EVIEPIRYPV TKDLQNMHLR VHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	3e-75	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG011700.2