PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG012530.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 283aa MW: 31228.2 Da PI: 8.462

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG012530.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.5	5.5e-33	30	89	1	60
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 ++DgynWrKYGqK+vkgse+prsYY+Ct+++C++kkkvers d+++++i+Y+g H+h+k TRIDC1BG012530.4 30 VEDGYNWRKYGQKQVKGSENPRSYYKCTYNNCSMKKKVERSLADGRITQIVYKGAHDHPK 89 58********************************************************85 PP
2	WRKY	104.4	6.1e-33	178	236	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vkg+++prsYY+Ct+ gCpv+k+ver+++d+++v++tYeg+H h+ TRIDC1BG012530.4 178 LDDGFRWRKYGQKVVKGNPNPRSYYKCTTVGCPVRKHVERASHDNRAVITTYEGRHSHD 236 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MFVQEQQQQQ QQQVVEVSNK SSSGDNNKQV EDGYNWRKYG QKQVKGSENP RSYYKCTYNN 60 CSMKKKVERS LADGRITQIV YKGAHDHPKP PSTRRNSSGC AAVIAEDHTN GSEHSGPTPE 120 NSSVTFGDDE ADNGAEPETK RRKEHGDNEG SSGGTVACVK PVREPRLVVQ TLSDIDILDD 180 GFRWRKYGQK VVKGNPNPRS YYKCTTVGCP VRKHVERASH DNRAVITTYE GRHSHDVPVG 240 RGAGASRALP TSSSSDSSPA AGHRGYAAKD EPRDDMFVES LLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	2e-89	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG012530.4