PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG012960.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 156aa MW: 17718.1 Da PI: 7.5737

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG012960.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31	4.2e-10	87	120	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++e++ +LA+ +gL+ +q+ +WF N+R ++ TRIDC1BG012960.5 87 WPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRH 120 59*****************************985 PP
2	ELK	34.4	4.8e-12	40	61	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsg+L+ L++EF+ TRIDC1BG012960.5 40 ELKEMLLKKYSGCLSRLRSEFL 61 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
MVSIMQDEMV GSSEDEPCSG DVDGSDAGMQ EHSSRLADHE LKEMLLKKYS GCLSRLRSEF 60 LKKRKKGKLP KDARLALMDW WNTHYRWPYP TEEDKVRLAA MTGLDPKQIN NWFINQRKRH 120 WKPSEDMRFA LMEGVTGGGG SSSGTTLYFD TGTIGP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	56	65	LRSEFLKKRK
2	62	66	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	3e-39	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG012960.5