PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG013330.14
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 573aa    MW: 63665.6 Da    PI: 6.3437
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG013330.14genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3573.5e-18224314199
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        f+k +  s+v +  +l +p +f++eh   ++ ++t++lede+g +++ ++  rk++    l++GW++F+  ++Lk+gD vvF+l++ ++f  
  TRIDC1BG013330.14 224 FVKLMQISHVVRVFWLGVPVSFCREHL--PNHDVTIVLEDEDGHRFDTNYLARKQG----LSGGWNRFATRHHLKVGDAVVFQLVEPTRF-- 307
                        88999999******************6..34789****************555555....9**********************9876666.. PP

                        EEEEE-S CS
                 B3  93 vvkvfrk 99 
                        +v ++r+
  TRIDC1BG013330.14 308 KVYILRE 314
                        8888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 573 aa     Download sequence    
SIHQSSRSKC IRPASHGDRR AHQKSKRGTP AGDPHSAKSK MGQKMVHRRR PLLDEGSSSR  60
NEDAGDDDDF EPMAMGGTPA GDSPHSARTK MGQKMSLAHR RLSLLDDGSS ISRHIAAAAA  120
AADDDGGGSE QMGEEFAVDV AQKNTTVDDS DDPDGSEDDF VPLIFQRKKP GRSAGPVYAK  180
RKIEKKPRLV GSNNISKISD DDGQKKYARA LEVEKKLPAE GPSFVKLMQI SHVVRVFWLG  240
VPVSFCREHL PNHDVTIVLE DEDGHRFDTN YLARKQGLSG GWNRFATRHH LKVGDAVVFQ  300
LVEPTRFKVY ILRETKFTTT DGALSLLSLD TSMENNMPEQ GEDTSDEDVK SKEDPEATKV  360
ITNKASDDDS NDLFSEEAAN GGIRSPDPDP DFDAVKTFRT FKMVMDSSVI DRKLVPDRLL  420
WTYYKLCGDR KAFLHRRLPK HINLTLAAGV IAETASIAEG IRSYPTSCSS SEELAAWKKT  480
LESFELLGMD VGFIRKRLDE LLFLLDARSS DDHPPEGYEE VKLERARAAE KMRALESKMA  540
SLKDALKDMD MEMEEIAEKR RGHAMLQLAA APW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-32B3 family protein