PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG013330.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 568aa    MW: 63026.9 Da    PI: 5.3688
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG013330.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3573.4e-18219309199
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k +  s+v +  +l +p +f++eh   ++ ++t++lede+g +++ ++  rk++    l++GW++F+  ++Lk+gD vvF+l++ ++f  +
  TRIDC1BG013330.6 219 FVKLMQISHVVRVFWLGVPVSFCREHL--PNHDVTIVLEDEDGHRFDTNYLARKQG----LSGGWNRFATRHHLKVGDAVVFQLVEPTRF--K 303
                       88999999******************6..34789****************555555....9**********************9876666..8 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       v ++r+
  TRIDC1BG013330.6 304 VYILRE 309
                       888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 568 aa     Download sequence    
MAIDEPTKSK RGTPAGDPHS AKSKMGQKMV HRRRPLLDEG SSSRNEDAGD DDDFEPMAMG  60
GTPAGDSPHS ARTKMGQKMS LAHRRLSLLD DGSSISRHIA AAAAAADDDG GGSEQMGEEF  120
AVDVAQKNTT VDDSDDPDGS EDDFVPLIFQ RKKPGRSAGP VYAKRKIEKK PRLVGSNNIS  180
KISDDDGQKK YASVLGFYVT AFDRALEVEK KLPAEGPSFV KLMQISHVVR VFWLGVPVSF  240
CREHLPNHDV TIVLEDEDGH RFDTNYLARK QGLSGGWNRF ATRHHLKVGD AVVFQLVEPT  300
RFKVYILRET KFTTTDGALS LLSLDTSMEN NMPEQGEDTS DEDVKSKEDP EATKVITNKA  360
SDDDSNDLFS EEAANGGIRS PDPDPDFDAV KTFRTFKMVM DSSVIDRKLV PDRLLWTYYK  420
LCGDRKAFLH RRLPKHINLT LAAGVIAETA SIAEGIRSYP TSCSSSEELA AWKKTLESFE  480
LLGMDVGFIR KRLDELLFLL DARSSDDHPP EGYEEVKLER ARAAEKMRAL ESKMASLKDA  540
LKDMDMEMEE IAEKRRGHAM LQLAAAPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-32B3 family protein