PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG013390.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 326aa MW: 35902.2 Da PI: 6.3473

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG013390.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.8	3.4e-20	47	94	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd llvd++ ++G g+W++ ar+ g++Rt+k+c++rw++yl TRIDC1BG013390.1 47 RGPWTAEEDMLLVDYISKHGEGRWNSLARCAGLRRTGKSCRLRWLNYL 94 89********************************************97 PP
2	Myb_DNA-binding	53.4	5.8e-17	100	143	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE++l++d++ ++G++ W++Ia++++ gRt++++k++w++ TRIDC1BG013390.1 100 RGNITPEEQLLILDLHSRWGNR-WSKIAQRLP-GRTDNEVKNYWRT 143 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MDMDKEYYKA CMGMEALPMS PAGFSAVTTE VTMVVATASE DEGDLKRGPW TAEEDMLLVD 60 YISKHGEGRW NSLARCAGLR RTGKSCRLRW LNYLRPDVRR GNITPEEQLL ILDLHSRWGN 120 RWSKIAQRLP GRTDNEVKNY WRTRVQKHAK QLHCDVNSDR FRDVVRQVWM PRLLERVQAE 180 SSSAAAAAAA GVGVPALTRA MSSPAGASQY HYHCVDHASS GEPSRKVAVT MSPDTSSTLR 240 SSLSPAETSH GAHFPAWGAA TATANVDGSM MQCAGREGGA IGGDQYVIHG DSLSGSWSEL 300 LAATDIPDFE FGNFDDNLWS LEDIYC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06490.1	2e-77	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG013390.1