PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG015340.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 328aa    MW: 36384.7 Da    PI: 6.6439
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG015340.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.13e-0884106426
                       ---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                       + C+ff+    C+ Gd+C+FaH 
  TRIDC1BG015340.1  84 RACKFFLTLKGCRNGDSCSFAHN 106
                       78********************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
ELPEPEHMTS LPLETDSSHL DSQRCAAIPY ISATDFGATD IVNTLMKVIE KMKIELAVTC  60
VDYHDGSSET YRGPLNNLSN ASKRACKFFL TLKGCRNGDS CSFAHNLGSL SSSSVTSKMN  120
PEDPPWPQAD IGWRKLVTGG ENGHILVVND KNLKFSSQLH NMVDITPDLH LAERNLVANN  180
LRKVQNVADP SHLTIGDEHE LPVPWTRLKR IILVDDYGSG STLNHHVLQK FFENIAIKIL  240
SGPLPSVQII LIMSNIKFVK IQVEKLAREC FFVLGESFLL NVAPLKWFPI MGIRQLDGQV  300
AGQVAYVFNM HPPSGAGIRW GDFATQEN