PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG018220.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 127aa    MW: 14071.9 Da    PI: 9.5332
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG018220.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.23.1e-202357135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C+ C+tt+Tp+WR+gp g++tLCnaCG++yrkk++
  TRIDC1BG018220.1 23 CVECRTTTTPMWRSGPTGPRTLCNACGIRYRKKRR 57
                      ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MDSSHHKVIG VAPAAAEGGR MCCVECRTTT TPMWRSGPTG PRTLCNACGI RYRKKRRQEL  60
GLDNKPQNQQ LNQQQQQQQQ QQQQQQREDH GEATSAVKKR TVSMGVEEAA FLLMALSSSS  120
TPPLLHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26930.13e-19GATA family protein