PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG018900.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 212aa    MW: 23062.5 Da    PI: 9.2353
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG018900.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH345.1e-112974454
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       h+e ErrRR+riN+ +++Lr+++P a       ++Ka+ L  +v+ +k+L
  TRIDC1BG018900.1 29 VHSESERRRRERINTHLATLRRMIPDA-----NQMDKATLLACVVNQVKEL 74
                      59************************8.....4799999998888877776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MATCQAPTSA PELSSSSGRS ATEVRSLKVH SESERRRRER INTHLATLRR MIPDANQMDK  60
ATLLACVVNQ VKELKRKATE TTRLQATVPI PPEANEITVQ CYTAASDNRT TCIHATVSCD  120
DRPGLFVGLT GAFRGLGLRV LRTETASLGG RASHLFVLCK EGRDVGAGMR ALEGAVRQAM  180
AEVAFPEMVC GGSSWSKRER ILEGRCPVMY SV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13439ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.15e-25bHLH family protein