PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG019490.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 210aa    MW: 21803.8 Da    PI: 8.9968
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG019490.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.21.5e-39291281100
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCk+lrr+Ca++C+++p f   +p+kfa vhk+FGasnv+k+l +++e++r da++slvyeA+ r+rdPvyG++g il+lqqq++ l+ae
  TRIDC1BG019490.1  29 PCAACKLLRRRCAQECPFSPFFSPLEPHKFASVHKVFGASNVSKMLLEVHESQRGDAANSLVYEANLRLRDPVYGCMGAILTLQQQVHALEAE 121
                       7******************************************************************************************** PP

            DUF260  94 lallkee 100
                       la++++e
  TRIDC1BG019490.1 122 LAAVRAE 128
                       ***9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MMAAARRSSS LPAAGAGPGS TPSFNTMTPC AACKLLRRRC AQECPFSPFF SPLEPHKFAS  60
VHKVFGASNV SKMLLEVHES QRGDAANSLV YEANLRLRDP VYGCMGAILT LQQQVHALEA  120
ELAAVRAEIL KHRYRPAAAA AASAVPNVPP SSHASQLLAA GGHRPAGSLG LAAPAVGPVA  180
SASSSTTVYA TASSSTDYSS ITHENVPYFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30340.16e-55LBD family protein