PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG022160.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 220aa    MW: 24673 Da    PI: 10.2619
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG022160.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF97.94.2e-3151101151
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                       krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs +g+lyeys+
  TRIDC1BG022160.6  51 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSGRGRLYEYSN 101
                       79***********************************************95 PP
2K-box103.52.7e-34118214399
             K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                       +ss   ++e +a+++qqe+akLk++i +Lq+++R l+G+ + ++s+++L+qLe +L+k+l kiR++Knell+++ie++q++e elq++n  Lr
  TRIDC1BG022160.6 118 TSSAGTVAEINAQHYQQESAKLKQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLCAEIEYMQRREMELQNNNFFLR 210
                       4455559999*********************************************************************************** PP

             K-box  96 kkle 99 
                       +k+ 
  TRIDC1BG022160.6 211 EKVS 214
                       *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
KGPRSSSARE SGIFTAQPEI QPVKESASPG SGSGSPGGAA EKMGRGRIEI KRIENTTNRQ  60
VTFCKRRNGL LKKAYELSVL CDAEVALIVF SGRGRLYEYS NNSVKATIER YKKATSDTSS  120
AGTVAEINAQ HYQQESAKLK QQITTLQNSN RTLIGDTMAT MSHRDLKQLE GRLDKGLGKI  180
RARKNELLCA EIEYMQRREM ELQNNNFFLR EKVSTWYLLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.15e-93MIKC_MADS family protein