PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG022160.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 206aa    MW: 23276.5 Da    PI: 10.3874
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG022160.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF983.8e-313787151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs +g+lyeys+
  TRIDC1BG022160.7 37 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSGRGRLYEYSN 87
                      79***********************************************95 PP
2K-box103.72.3e-34104200399
             K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                       +ss   ++e +a+++qqe+akLk++i +Lq+++R l+G+ + ++s+++L+qLe +L+k+l kiR++Knell+++ie++q++e elq++n  Lr
  TRIDC1BG022160.7 104 TSSAGTVAEINAQHYQQESAKLKQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLCAEIEYMQRREMELQNNNFFLR 196
                       4455559999*********************************************************************************** PP

             K-box  96 kkle 99 
                       +k+ 
  TRIDC1BG022160.7 197 EKVS 200
                       *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
SKKATERKVK ESASPGSGSG SPGGAAEKMG RGRIEIKRIE NTTNRQVTFC KRRNGLLKKA  60
YELSVLCDAE VALIVFSGRG RLYEYSNNSV KATIERYKKA TSDTSSAGTV AEINAQHYQQ  120
ESAKLKQQIT TLQNSNRTLI GDTMATMSHR DLKQLEGRLD KGLGKIRARK NELLCAEIEY  180
MQRREMELQN NNFFLREKVS TWYLLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.17e-94MIKC_MADS family protein