PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG025500.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 255aa    MW: 28472.1 Da    PI: 5.6786
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG025500.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP75.65.1e-249861571
           E2F_TDP 15 klleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71
                      +++ek+e  g++t+neva+eLv+e                     d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  TRIDC1BG025500.4  9 SVCEKVEGkGRTTYNEVADELVAEfadpnsnigspdpdnpntqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 86
                      699**9999************************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MKRFIWSFSV CEKVEGKGRT TYNEVADELV AEFADPNSNI GSPDPDNPNT QQYDEKNIRR  60
RVYDALNVLM AMDIISKDKK EIQWKGLPRT SLSDIDKLKT EVIGLKGRID KKSAYLQELQ  120
DQYVGLQNLV ERNEQLYGSG DAPSGGVALP FILVQTRPHA TVEVEISEDM QLVHFDFNST  180
PFELHDDSFV LKAMGFSGKE ETDGTVALVA NAVECSSASN VYGHRSPQPA RPNGIRLRTS  240
PPIPGILKGR VKHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-110E2F/DP family protein