PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG028530.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 187aa    MW: 19125.8 Da    PI: 8.0997
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG028530.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding346.9e-114480947
                      HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      ++l++++++ lG++ W+ Ia+ ++ gRt++++k+ w+ +
  TRIDC1BG028530.1 44 EDLIIRLHQALGNR-WSVIAAQLP-GRTDNEIKNVWHAH 80
                      6799**********.*********.***********876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MATPTGAPSP STQGFCGAGR AVACGGSTTS ARTSSGATSP ADKEDLIIRL HQALGNRWSV  60
IAAQLPGRTD NEIKNVWHAH LKKRLEDGLK PAADQDAGGS GRKKSRKQSK ARSATVDAGE  120
QYTSPPGQSS SGLTCSTVTE SAPAVSSSPS DNATITSASH GHQLVKEDTS SSEAVTDNSF  180
LSSTDVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101108GRKKSRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.21e-23MYB_related family protein