PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG032780.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 197aa    MW: 21180.7 Da    PI: 4.7939
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG032780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.5e-182474156
               AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56
                      + y+GVr++   g+Wv+eIr+       +  r++lg++ t+e+Aa+a++aa+++l+g+
  TRIDC1BG032780.1 24 PVYRGVRFR--AGKWVSEIRElR-----KqSRIWLGTYPTPEMAAAAYDAAALALRGA 74
                      68*****96..5*********55.....34*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MEQGREGMMG SLCGRRPRAE TRHPVYRGVR FRAGKWVSEI RELRKQSRIW LGTYPTPEMA  60
AAAYDAAALA LRGAGTALNF PDAARSRPAP ASMSADDVRA AAAAAAASAM GSTWAPHRSD  120
QCCGDQLRAG ESDRRDDVIG VVDEDDVFEM PRLMVSMAEG LMINPPVLGT AAADSCSAAS  180
YYAEIEDEDA VSLWDHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.13e-16ERF family protein