PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG033940.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 233aa    MW: 24373.2 Da    PI: 9.8883
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG033940.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix111.64.6e-3540125187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW+k ev+aLi++r++++ r++++  k+plWee+s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+qlea
  TRIDC1BG033940.1  40 RWPKTEVHALIQLRSNLDMRYQEAGPKGPLWEEISAGMRRMGYNRSSKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLEA 125
                       8*********************************************************************8.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
QAPVVNSSCM DIVVAPPSEA PHDSSGYDGS GGGSGPASSR WPKTEVHALI QLRSNLDMRY  60
QEAGPKGPLW EEISAGMRRM GYNRSSKRCK EKWENINKYF KKVKESNKKR PEDSKTCPYF  120
HQLEALYRNK AALGSPSGGG GALALPPPAE HANAAPQERI EAFTVAAPIS QTAPQQPPVA  180
KNDASNAGNG NGNGGGVSAG VSGGVQRLAA SNGGSRFVFS EAGGDAVAKK KAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.15e-53Trihelix family protein