PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG033970.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 277aa MW: 29567.4 Da PI: 9.0038

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG033970.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	81	3.6e-25	36	93	4	61
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaes 61 seq+Cyv+C fC+t+l+vsvPs+slfk+vtvrCGhC+sll+v+++ ++++ TRIDC1BG033970.3 36 EAPSEQLCYVHCHFCDTVLVVSVPSSSLFKTVTVRCGHCSSLLTVDMRGLLFPTTTTT 93 5689******************************************998775554444 PP
2	YABBY	132.9	4.2e-41	188	252	107	170
YABBY 107 eevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 e +pr+ p v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl TRIDC1BG033970.3 188 EPSPRTNPvVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 252 5577887769*****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
SSGASAAFTP VSQQQQQMAS ESLSSELQPP ASMQPEAPSE QLCYVHCHFC DTVLVVSVPS 60 SSLFKTVTVR CGHCSSLLTV DMRGLLFPTT TTTVAAESAA SAVTTTTSPP PAAAAHHGQF 120 HYPSSLNLTP GNPPRHSLLD EISSANPSLQ LLDQHGLGGL IAAAGGRNTA APAPLPPPPV 180 AAGKGGKEPS PRTNPVVNRP PEKRQRVPSA YNRFIKDEIQ RIKAGNPDIS HREAFSAAAK 240 NWAHFPHIHF GLMPDHQGLR KTSLLPQFLF RKSYSYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45190.1	1e-39	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG033970.3