PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG035770.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 136aa    MW: 14773.1 Da    PI: 10.6486
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG035770.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF953.5e-3058108151
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                       krien + rqvtfskRrng+lKKA+ELSvLCdaeva+++fs++g+lye++s
  TRIDC1BG035770.2  58 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVVFSPRGRLYEFAS 108
                       79***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
PGYAGRGSRG RAVLPAPLLL LARLAISVGD WPVFGGGEGI DRAPPAAGRM VRGKTEMKRI  60
ENATSRQVTF SKRRNGLLKK AFELSVLCDA EVALVVFSPR GRLYEFASAT SMQKSIDCYK  120
AYTKDTVNNK TVQPDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.13e-41MIKC_MADS family protein