PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG036000.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 185aa    MW: 19389.4 Da    PI: 4.2299
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG036000.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding223.7e-072262045
                      TTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwq 45
                      G+++W+ Ia+ ++ gRt+  +k++w+
  TRIDC1BG036000.2  2 GSNSWSVIAAQLP-GRTDLAVKNYWN 26
                      7889*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
IGSNSWSVIA AQLPGRTDLA VKNYWNGTIS KRFHWASSAA AARRRRSLHR PSSSTTSDAT  60
EPEELALVVH DEASSTTGSS CYAGGFVDGA GSPPLVQAQT PLAAGGWNAA KEEAGDETVP  120
IERKPVVAPA PLPENAPAPP GDGAGAMGMV CSPMTANPLP SMEPDDMPWI DGFDEIDSFL  180
PWFDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G05100.13e-08MYB family protein