PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG037430.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 407aa MW: 43542.2 Da PI: 7.0763

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG037430.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.8	6.2e-16	222	267	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hne Er+RRdriN+++++L++l+P++ K +Ka++L ++++++k+Lq TRIDC1BG037430.5 222 HNESERKRRDRINQKMQTLQKLVPNS-----SKTDKASMLDEVIDHLKQLQ 267 ***********************8.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MPMPDQYDEV AELTWEKGNI FWQGLLNRSV PKYPAAPAPA QMHAIGGAGD HRETLEAVVG 60 EAAARLSSQS TSHLGQPLPA AVAPWLGVGA PADGLVPCAR GDDQAEGGVR RKRARQVGED 120 GRVCASQGSA APGRGESSLL TLEPCGTGAD DLCGFTTTNN STSLDHGSPE TENTSFGGGA 180 SDSRCFSRRD GLCDEAENVV IKGEAPMRSS ISTKRSRAAA IHNESERKRR DRINQKMQTL 240 QKLVPNSSKT DKASMLDEVI DHLKQLQATV QMMNRMSSMM MPMAMPQLAQ MSVMANMAQM 300 AQMAQMGLGM MNMAGPLAQP AYPGLTQPMM QASTPFVAMQ PWNAGAGADR QKQSAAVPDA 360 YSAFLACQAA QQNTQQAQPN GMEAYSRMMA MYQKLSQQQT RPGSSKE

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MPMPDQYDEV AELTWEKGNI FWQGLLNRSV PKYPAAPAPA QMHAIGGAGD HRETLEAVVG  60
EAAARLSSQS TSHLGQPLPA AVAPWLGVGA PADGLVPCAR GDDQAEGGVR RKRARQVGED  120
GRVCASQGSA APGRGESSLL TLEPCGTGAD DLCGFTTTNN STSLDHGSPE TENTSFGGGA  180
SDSRCFSRRD GLCDEAENVV IKGEAPMRSS ISTKRSRAAA IHNESERKRR DRINQKMQTL  240
QKLVPNSSKT DKASMLDEVI DHLKQLQATV QMMNRMSSMM MPMAMPQLAQ MSVMANMAQM  300
AQMAQMGLGM MNMAGPLAQP AYPGLTQPMM QASTPFVAMQ PWNAGAGADR QKQSAAVPDA  360
YSAFLACQAA QQNTQQAQPN GMEAYSRMMA MYQKLSQQQT RPGSSKE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	226	231	ERKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	2e-37	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG037430.5