PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG037970.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 230aa    MW: 25227.6 Da    PI: 10.3089
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG037970.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.91.7e-102623086
          trihelix 30 lWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                      +W+ev+ ++        +   +s +qC++k+e+l+kry+++++++ +r+++   ++p+f  l+
  TRIDC1BG037970.3  2 DWDEVAGAVtarcgrFPTATYKSGVQCRHKIEKLRKRYRAERTRSMGRSKG--PKWPFFPLLH 62
                      6999999998877776677889************************98443..47****9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
ADWDEVAGAV TARCGRFPTA TYKSGVQCRH KIEKLRKRYR AERTRSMGRS KGPKWPFFPL  60
LHDLAGGGVP DASPNPIIKI KPRGNATPAS PSPVSSPSSE DAGRSRSLHG LISNGGGGSG  120
LRFTIPKASR TKPGVPREAR PDRDRGEEDP EAEAMTEVAS ALRAVGEGFL RMEERRLELS  180
LQMEKERMES EMKRTQALLD AQQLFVEAFL GKQQPHHKKL VSSAAAMEED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24860.17e-12Trihelix family protein