PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG038430.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 270aa    MW: 29560.4 Da    PI: 9.3129
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG038430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.81.6e-1590134347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+ +++++ kqlG+g+W+ I++ + ++Rt+ q+ s+ qky
  TRIDC1BG038430.1  90 PWTEEEHRKFLEGLKQLGKGDWRGISKNFVTTRTATQVASHAQKY 134
                       7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MEEEGAKKAV LFRLFGVEVR GAEEEDDAEP MELKKSTSMP NLACASTDPI LLPGEASNDK  60
GYASDDGELA STPQLKRRRR KAQERKKGIP WTEEEHRKFL EGLKQLGKGD WRGISKNFVT  120
TRTATQVASH AQKYFLRQTN PGKKKRRASL FDVGIPAGHS YDDQLPSPQS VGTKLAPAEK  180
ILHTDRGDVP LPSYPGDIRG NNNNNNNMQM QADELTDHVK KRSKFHSGTS LAAMAASGLE  240
LAMSSSASSI LELSIAPPRC YGAVDAIKVL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17681KRRRRK
27687KRRRRKAQERKK
37787RRRRKAQERKK
4143147KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.11e-33MYB_related family protein