PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG038430.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 212aa MW: 23573.5 Da PI: 9.6132

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG038430.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	20.1	1.4e-06	89	134	4	53
G2-like 4 lrWtpeLHerFveaveqLG.GsekAtPktilelmkvkgLtlehvkSHLQkY 53 + Wt+e H++F+e ++qLG G + + k+ v t ++v+SH QkY TRIDC1BG038430.3 89 IPWTEEEHRKFLEGLKQLGkGDWRGISKN----F-VTTRTATQVASHAQKY 134 67**************84555555554....4.5677999******* PP
2	Myb_DNA-binding	49.4	1.1e-15	90	134	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++++ kqlG+g+W+ I++ + ++Rt+ q+ s+ qky TRIDC1BG038430.3 90 PWTEEEHRKFLEGLKQLGKGDWRGISKNFVTTRTATQVASHAQKY 134 7*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MEEEGAKKAV LFRLFGVEVR GAEEEDDAEP MELKKSTSMP NLACASTDPI LLPGEASNDK 60 GYASDDGELA STPQLKRRRR KAQERKKGIP WTEEEHRKFL EGLKQLGKGD WRGISKNFVT 120 TRTATQVASH AQKYFLRQTN PGKKKRRASL FDVGIPAGHS YDDQLPSPQS VGTKLAPAEK 180 ILHTDRGDVP LPSYPGDIRG NNNNNNNMQM QV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	76	81	KRRRRK
2	76	87	KRRRRKAQERKK
3	77	87	RRRRKAQERKK
4	143	147	KKKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61620.1	2e-34	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG038430.3