PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG038430.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 217aa    MW: 23857.8 Da    PI: 9.2548
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG038430.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like201.5e-0696141453
           G2-like   4 lrWtpeLHerFveaveqLG.GsekAtPktilelmkvkgLtlehvkSHLQkY 53 
                       + Wt+e H++F+e ++qLG G  + + k+      v   t ++v+SH QkY
  TRIDC1BG038430.4  96 IPWTEEEHRKFLEGLKQLGkGDWRGISKN----F-VTTRTATQVASHAQKY 141
                       67****************84555555554....4.5677999********* PP
2Myb_DNA-binding49.31.1e-1597141347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+ +++++ kqlG+g+W+ I++ + ++Rt+ q+ s+ qky
  TRIDC1BG038430.4  97 PWTEEEHRKFLEGLKQLGKGDWRGISKNFVTTRTATQVASHAQKY 141
                       7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
PAPSGEGMEE EGAKKAVLFR LFGVEVRGAE EEDDAEPMEL KKSTSMPNLA CASTDPILLP  60
GEASNDKGYA SDDGELASTP QLKRRRRKAQ ERKKGIPWTE EEHRKFLEGL KQLGKGDWRG  120
ISKNFVTTRT ATQVASHAQK YFLRQTNPGK KKRRASLFDV GIPAGHSYDD QVLGSSPIRA  180
KHSKHPSDRA ANVCSLLNFN LVSAAKSSEC WNQACSC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18388KRRRRK
28394KRRRRKAQERKK
38494RRRRKAQERKK
4150154KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.15e-34MYB_related family protein