PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG038790.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 357aa    MW: 37531.8 Da    PI: 7.4836
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG038790.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.76.9e-18255289135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++C + kTp+WR gp g+ktLCnaCG+++++ +l
  TRIDC1BG038790.2 255 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL 289
                       *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MASEWEMAMS VELGMGMGSY HNASNVHAAP MGHQAGGYSA AAHHFYGMQP MRDASMRVDE  60
LLDFPTAGAH DFFPAAPENG LHHHHHLGAG VGELSATTPS ATSSDHQTSM LSFADEFYIP  120
SEEAAELEWL SKFVDDSYSD MPNYSSAAHA AMAAANAVNN GGGSSAGQDS CVTAVPGRGA  180
RSKRSRASAA AAAAWHSLMP RPPSQPSPSS SCSSSDFPSS TTARPSGSNC GSRGKKQGPV  240
AGGEVGLVEG GVRRCTHCAS EKTPQWRTGP LGPKTLCNAC GVRFKSGRLV PEYRPAASPT  300
FLLTQHSNSH RKVMELRRQK ELVLIRGSHR LDASAAAGPG PGVTVKPELM FHDYGIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.13e-44GATA family protein