PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG038790.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 160aa    MW: 16980.4 Da    PI: 10.4713
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG038790.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.32.1e-185892135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C++C + kTp+WR gp g+ktLCnaCG+++++ +l
  TRIDC1BG038790.4 58 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL 92
                      *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
LMPRPPSQPS PSSSCSSSDF PSSTTARPSG SNCGSRGKKQ GPVAGGEVGL VEGGVRRCTH  60
CASEKTPQWR TGPLGPKTLC NACGVRFKSG RLVPEYRPAA SPTFLLTQHS NSHRKVMELR  120
RQKELVLIRG SHRLDASAAA GPGPGVTVKP ELMFHDYGIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.17e-46GATA family protein