PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG039910.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 185aa    MW: 19251.6 Da    PI: 8.4623
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG039910.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.4e-195098355
               AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      y+G+r+++ +grW+AeIrdp++    +r++lg++ +aeeAa+a++ a++ ++g
  TRIDC1BG039910.2 50 YRGIRRRP-WGRWAAEIRDPRK---GARVWLGTYASAEEAARAYDVAARDIRG 98
                      9*******.**********954...4**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MCGGAVIADF VPAGARRPDG SSADVPGSSL TVTGEEVTEK SPAPGRKTAY RGIRRRPWGR  60
WAAEIRDPRK GARVWLGTYA SAEEAARAYD VAARDIRGPK AKLNFPPAVG APQEAAAVAG  120
AGAPKKRRIV AAEESSASWS PLPAPASGGG GGTDSLRERM SGLEAFLGLE DGNVEPWEAV  180
DLIME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.12e-24ERF family protein