PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG041800.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 217aa    MW: 22860.6 Da    PI: 5.9615
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG041800.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.86.3e-193686155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      + ++GVr++  +g+WvAeIr+p   + r +r +lg+f ta +Aa+a++aa+++l+g
  TRIDC1BG041800.1 36 CPFRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFATALDAARAYDAAARALYG 86
                      679****999.**********8...3.35***********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MEQEVVAGMK QKKCCPLRRS RKGCMKGKGG PDNQQCPFRG VRQRTWGKWV AEIREPNRGA  60
RLWLGTFATA LDAARAYDAA ARALYGDCAR LNLSASPSQM QHPPAQGSGA NGNSAPGTPC  120
CSSNNSNSSA STPTGTPTDM DCSAWMQPSY CYSTAEAPED FEAYVTRLPK AEDFGLEGFQ  180
EVPLEVLAEA GGGVSIWDLS IAPDMAAAAA SSAAASA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.14e-29ERF family protein