PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG043300.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 318aa    MW: 34967.7 Da    PI: 6.7805
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG043300.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.83e-141462148
                      TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                      rg+W++eEd  l+ ++++ G+g +W + ++++g++R++k+c++rw++yl
  TRIDC1BG043300.2 14 RGPWSPEEDAMLKAYIEERGTGnNWIALPHKIGLKRCGKSCRLRWLNYL 62
                      89*********************************************97 PP
2Myb_DNA-binding40.27.8e-1369111246
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       g +T+eEd  + ++    G++ W+ Ia+ ++ gRt++++k++w++
  TRIDC1BG043300.2  69 GDFTPEEDSTICKLYISIGSR-WSIIAAQLP-GRTDNDVKNYWNT 111
                       789******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MGRAPCCDKA TVKRGPWSPE EDAMLKAYIE ERGTGNNWIA LPHKIGLKRC GKSCRLRWLN  60
YLRPNIKHGD FTPEEDSTIC KLYISIGSRW SIIAAQLPGR TDNDVKNYWN TKLKKRLLGG  120
RRKDRGAGTQ QHRQGELDGA NNDGEQQPLS ASAMERIQLC MQLQEMQNPL SSIGNHNNSL  180
HLWQPSSHHQ VAATHSNNSN SNSSRSSSFD VTVAAEQGQS SSLNGQHLGG QQQMETAAAA  240
DGLASPSSAG NSNIVTIEAE LQELLYSATT TTTDSVVTQQ GGVDWWSYDQ GKSPVNCWDF  300
TPETSSVLQD YAAVVYDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.13e-75MYB family protein