PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG043410.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 133aa    MW: 13873 Da    PI: 9.4831
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG043410.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP61.32.3e-1986133148
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 
                       +Cqv+gCead+ e+k yh+rh+vC  +++a++v+++g ++r+CqqC++
  TRIDC1BG043410.4  86 RCQVPGCEADIRELKGYHKRHRVCLRCAHASAVMIDGAQKRYCQQCGK 133
                       6*********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
SRRGVRKRDP RLVCPNYLAG IVPCACPELD EMAAAAEVEE VAAEVLAGPR KKPRAGSRGS  60
SGAVVKIGGG GGGSGVAGRG GAAEMRCQVP GCEADIRELK GYHKRHRVCL RCAHASAVMI  120
DGAQKRYCQQ CGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18830.32e-32SBP family protein