PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG044070.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 166aa MW: 18264 Da PI: 9.2953

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG044070.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	141.2	3.2e-44	59	157	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +CaaCk+lrrkC++dCv+apyfp ++p+kf vh++FGasnv+kll++l++ +reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+++ TRIDC1BG044070.2 59 PCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELNPYQREDAVNSLAYEADMRLRDPVYGCVGVISVLQHQLRQLQQD 151 7******************************************************************************************** PP DUF260 94 lallke 99 l +++ TRIDC1BG044070.2 152 LTRARY 157 998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
VFSFLLGIWI SFARKLDRPI HRSMASSSAS SFPGSVITMA SSAAAVGAAS SGAAGTGSPC 60 AACKFLRRKC QPDCVFAPYF PPDNPQKFVH VHRVFGASNV TKLLNELNPY QREDAVNSLA 120 YEADMRLRDP VYGCVGVISV LQHQLRQLQQ DLTRARYELS KYQFCI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65620.3	1e-51	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG044070.2