PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG044070.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 172aa    MW: 18422.8 Da    PI: 8.2811
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG044070.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260141.13.6e-4436134199
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCk+lrrkC++dCv+apyfp ++p+kf  vh++FGasnv+kll++l++ +reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+++
  TRIDC1BG044070.3  36 PCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELNPYQREDAVNSLAYEADMRLRDPVYGCVGVISVLQHQLRQLQQD 128
                       7******************************************************************************************** PP

            DUF260  94 lallke 99 
                       l +++ 
  TRIDC1BG044070.3 129 LTRARY 134
                       998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MASSSASSFP GSVITMASSA AAVGAASSGA AGTGSPCAAC KFLRRKCQPD CVFAPYFPPD  60
NPQKFVHVHR VFGASNVTKL LNELNPYQRE DAVNSLAYEA DMRLRDPVYG CVGVISVLQH  120
QLRQLQQDLT RARYELSKYQ ASVGCNGTPA MADFIGNTVP NCTQNFINIS HS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65620.35e-52LBD family protein