PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG044940.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 130aa    MW: 14451.6 Da    PI: 10.4662
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG044940.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.21.6e-2676125150
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
            SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 
                       krien+snrqvtf+kRr+g+ KKA E+ vLCdaev v+ifss gkly++ 
  TRIDC1BG044940.1  76 KRIENSSNRQVTFAKRRAGLVKKAREIGVLCDAEVGVVIFSSAGKLYDFW 125
                       79*********************************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MAATLLYSSH PPPAMAFTPA HKDRHHHRPL LLPSVHTPQR QGREESSGSW VLLGPLSFFS  60
ASEELVEMGR GKIEIKRIEN SSNRQVTFAK RRAGLVKKAR EIGVLCDAEV GVVIFSSAGK  120
LYDFWTPKTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.21e-28MIKC_MADS family protein