PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG046650.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 201aa    MW: 22135.7 Da    PI: 7.7259
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG046650.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.57.2e-14133177347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +WT+eE+  ++++ +++G g+W+ I+r   k+Rt+ q+ s+ qky
  TRIDC1BG046650.2 133 PWTEEEHRMFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKY 177
                       7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MAFYRGSGMG MGMGGGSSSS WAPAAMPPPP PPPSRPWTKA EDKVFESALV AIPEHVPNRW  60
VFVAAQLPGR TPQEAWEHYQ ALVADIDLIE RGLVEAPESW DDDDDGAAAG GTVAAGRGRP  120
RGSGCEERRK GIPWTEEEHR MFLEGLEKYG RGDWRNISRW SVKTRTPTQV ASHAQKYFIR  180
QANAATRGDS KRKSIHDITN P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.18e-46MYB_related family protein