PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG046850.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 305aa    MW: 33956.1 Da    PI: 7.3883
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG046850.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.41.2e-05119138120
                       EEETTTTEEESSHHHHHHHH CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                       + C+ C+k+F+r  n++ H+
  TRIDC1BG046850.3 119 FICHVCSKTFNRYNNMQMHM 138
                       89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
SPIKEELSGI TEDAGVDLNI GLPASGGYSS EEEVPPMAMS MDEDEEDEEE VETEEEEEKP  60
RYDGCKVQPG VHVEHSEMLA ESVEGSDHVS VAGEESSGCR HRRFWIPTPA QILIGAVQFI  120
CHVCSKTFNR YNNMQMHMWG HGREYRKGPD SLKGAAGQST HAAALALLRL PCYCCAAGCR  180
NNVAHPRARP LKDFRTLQTH YRRKHGAKPF ACRRCAKPFA VKGDWRTHEK NCGKRWFCAC  240
GSDFKHKRSL NDHVRSFGGG HHPVAPAEAP ASGAAPTQQH RERIIRFDQC RGARALEQGA  300
HTRVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20880.19e-93C2H2 family protein