PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG047240.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 176aa MW: 19415.7 Da PI: 10.1055

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG047240.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.3	9.9e-15	27	71	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + k++G g+W+ I+r + Rt+ q+ s+ qky TRIDC1BG047240.1 27 PWTEEEHKLFLMGLKKYGRGDWRNISRNYVTSRTPTQVASHAQKY 71 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence
FKRSCYMAAG NGKRGRGSDQ ERKKGVPWTE EEHKLFLMGL KKYGRGDWRN ISRNYVTSRT 60 PTQVASHAQK YFIRLNSGGK DKRRSSIHDI TTVNIPDDDH ASNTNPSPSP PSALTATSSA 120 PEQFGALVDS KPPPLGGHHH FMPHLYGSVK LEASNNGYHG DSVLMQMQCG QLQPLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	7e-50	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG047240.1