PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG048510.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 148aa    MW: 16156.1 Da    PI: 12.341
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG048510.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.60.001885107123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C  Cg  F     L  H+r+H
  TRIDC1BG048510.1  85 HECAVCGLEFAMGQALGGHMRRH 107
                       78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
GAESAHADAQ QLTPPATPGA DDRAATGSRR RPPAGGGDGD GGAFVCRTCS RRFPTFQALG  60
GHRTGHTRLQ ARQQRPAPRK PRPHHECAVC GLEFAMGQAL GGHMRRHKQV EPQAHRRQAG  120
TCAGTSRPGH RRRACRMSTT SRRRRRWT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131146RRRACRMSTTSRRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.12e-18C2H2 family protein