PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG048940.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 125aa    MW: 13256.9 Da    PI: 5.2606
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG048940.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB182.14.7e-5732124193
              NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 
                        vreqdrflPian+srimkk++Pan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfe+y+eplkvyl+kyre
  TRIDC1BG048940.11  32 VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEEYIEPLKVYLQKYRE 123
                        69*****************************************************************************************9 PP

              NF-YB  93 l 93 
                        +
  TRIDC1BG048940.11 124 V 124
                        7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MSDAPASPPG GGGGGGGGGS DDGGGGGGFG GVREQDRFLP IANISRIMKK AIPANGKIAK  60
DAKETVQECV SEFISFITSE ASDKCQREKR KTINGDDLLW AMATLGFEEY IEPLKVYLQK  120
YREVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.12e-62NF-YB family protein