PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG049260.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 419aa MW: 45361.4 Da PI: 5.1998

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG049260.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.6	2.2e-13	189	240	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e+I++L+ TRIDC1BG049260.3 189 QRMTHIAVERNRRRQMNDYLRVLRSLMPGS---YVQRGDQASIIGGAIEFIRELE 240 79**************************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
YMHASHRSRM HLDTFAQLDG GAAPEEPIGG GAGAEMVDYM LGQTTPLPPG GPHGQVSLDK 60 LSFSDVLQFA DFGPRLALNQ PSADHDDARD DDEEDSYFFR FQSQLSGSDD PDPRGGAGIH 120 HAAEHEGSKT ADGSGGPHDH GGGVSESTTL VQQSDGGGRV GQKAGGEQAK SGRRKRPRST 180 KTSEEVESQR MTHIAVERNR RRQMNDYLRV LRSLMPGSYV QRGDQASIIG GAIEFIRELE 240 QLIQCLESQK RRRLYGDTPR PVADASAPVV PATSIHEPPP QGHEAPPFYV SPSLSFPAAG 300 NGDGAAGAKV MIDLDTCGGG LREEVAENKS SLADIEVRVL GEDAVIKVLS RRRPEQLIKT 360 IAELEEMHMS ILHTNITTIE QTVLYSFNVK VPSEPRFTAE EIVGAVHQIL SFIDVNYTL

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

YMHASHRSRM HLDTFAQLDG GAAPEEPIGG GAGAEMVDYM LGQTTPLPPG GPHGQVSLDK  60
LSFSDVLQFA DFGPRLALNQ PSADHDDARD DDEEDSYFFR FQSQLSGSDD PDPRGGAGIH  120
HAAEHEGSKT ADGSGGPHDH GGGVSESTTL VQQSDGGGRV GQKAGGEQAK SGRRKRPRST  180
KTSEEVESQR MTHIAVERNR RRQMNDYLRV LRSLMPGSYV QRGDQASIIG GAIEFIRELE  240
QLIQCLESQK RRRLYGDTPR PVADASAPVV PATSIHEPPP QGHEAPPFYV SPSLSFPAAG  300
NGDGAAGAKV MIDLDTCGGG LREEVAENKS SLADIEVRVL GEDAVIKVLS RRRPEQLIKT  360
IAELEEMHMS ILHTNITTIE QTVLYSFNVK VPSEPRFTAE EIVGAVHQIL SFIDVNYTL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	201	RMTHIAVERNRR
2	250	254	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-104	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG049260.3