PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG050560.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 235aa    MW: 26063.6 Da    PI: 5.1976
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG050560.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY79.73.2e-2543102258
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                       +Dg+ WrKYGqKe++++++pr Y+rCt++   gC+++++v+++++dp++ +itY g+H++
  TRIDC1BG050560.4  43 EDGFIWRKYGQKEIHNNKHPRLYFRCTYKhdiGCQATRQVQQAEDDPSLYVITYFGDHTC 102
                       8***************************99999*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
GVSGGRKRKS GPGGADNLTR PKRRMRESSG EKEARVERRR TAEDGFIWRK YGQKEIHNNK  60
HPRLYFRCTY KHDIGCQATR QVQQAEDDPS LYVITYFGDH TCCQGDAAGA VLEAEDVKMQ  120
PFVINFGSAT ASSGKPWLSL PSDTDDGRRS DSGASRSSQV VCSLEEFEVK EVKVESTSEH  180
SHSTDPAAAE LSSSADFSCA SPAWDPLSGC LDWDRFGDSQ FDCEFMDFDA IPLFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.15e-23WRKY family protein