PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG050930.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 128aa    MW: 14241.6 Da    PI: 4.1326
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG050930.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.31.8e-1517871795
                      E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                       lp +f+++h  ++ ++ +++lede+g +++  +   +++ +  l++GW++F   ++L++gD++vF+l + ++f+    
  TRIDC1BG050930.6 17 GLPSSFCKDHL-PP-REHKMVLEDEEGVEFDAVY--IGNRTG--LSGGWRGFSMHHDLEDGDSLVFELAEPDRFKI--Y 87
                      69*****9994.44.4459***************..555444..***********************987677744..3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 128 aa     Download sequence    
MQDQLIVTVT NFPLHKGLPS SFCKDHLPPR EHKMVLEDEE GVEFDAVYIG NRTGLSGGWR  60
GFSMHHDLED GDSLVFELAE PDRFKIYISK AIEDGKEAEP NDKNADVDSD SAQEVPDQTD  120
SPVSEPPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.12e-23B3 family protein